BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F11LP1|AL426251
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1771 1542 0.0
>3x_Contig1771
Length = 25932
Score = 1542 bits (777), Expect = 0.0
Identities = 788/791 (99%), Gaps = 1/791 (0%)
Strand = Plus / Minus
Query: 1 gatccgtcggtccaaccagtaccaacgcgcaaagatacacggcctcaacaagctccgcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15070 gatccgtcggtccaaccagtaccaacgcgcaaagatacacggcctcaacaagctccgcga 15011
Query: 61 nttcgttagctgaaaagatcatcgacgaattgccagaattacaaccgcatgtggaatcta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15010 -ttcgttagctgaaaagatcatcgacgaattgccagaattacaaccgcatgtggaatcta 14952
Query: 121 ttatcgccagaacatctcctcaacgcacagatcccatctcgccttccattgttgacaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14951 ttatcgccagaacatctcctcaacgcacagatcccatctcgccttccattgttgacaaac 14892
Query: 181 cttaaatatgtatttctggtttttattttcatccaatagaaagaaaatcaaaaaaaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14891 cttaaatatgtatttctggtttttattttcatccaatagaaagaaaatcaaaaaaaatta 14832
Query: 241 caacagagtttacttgagcgatgagagcgacttactgttggagtggaacggattatatca 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 14831 caacagagtttacttgagcgatgagagcgacttactgttggagtggaacgaattatatca 14772
Query: 301 tttctttagcctgaaaacctagtgattactattgctcaatacagtatatcactaggtgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14771 tttctttagcctgaaaacctagtgattactattgctcaatacagtatatcactaggtgag 14712
Query: 361 tyatattaaatgggtaaaaatacgaaggcaaagaagcgcgctgcttctttggaggtgttg 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14711 tcatattaaatgggtaaaaatacgaaggcaaagaagcgcgctgcttctttggaggtgttg 14652
Query: 421 gcctccaaaagttctccaatattggagtttgtattcgatgagccgttaattcacgttgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14651 gcctccaaaagttctccaatattggagtttgtattcgatgagccgttaattcacgttgca 14592
Query: 481 tgccatcctgagcagccaattgtagtttgcgctatcgctacaggccatgttttctgttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14591 tgccatcctgagcagccaattgtagtttgcgctatcgctacaggccatgttttctgttgt 14532
Query: 541 aaatacgacgctaaagctttgaaacgtatcttgaataagaacgaagccaagcttgccgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14531 aaatacgacgctaaagctttgaaacgtatcttgaataagaacgaagccaagcttgccgca 14472
Query: 601 ttggaaaacaaagatgatcagaaacgtaagaggttttggaagttgataaaactgaaggcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14471 ttggaaaacaaagatgatcagaaacgtaagaggttttggaagttgataaaactgaaggcg 14412
Query: 661 gaaatggatacttatgagctagaagagggagaagagaccgccgcggttgagctactatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14411 gaaatggatacttatgagctagaagagggagaagagaccgccgcggttgagctactatgg 14352
Query: 721 aagactagaaggcacaaggggagtgtcagagggatgagtttcaataacgatggttcgaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14351 aagactagaaggcacaaggggagtgtcagagggatgagtttcaataacgatggttcgaaa 14292
Query: 781 ttgtataccat 791
|||||||||||
Sbjct: 14291 ttgtataccat 14281
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5922
Number of Sequences: 1807
Number of extensions: 5922
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)